Model profile

Extra Trees (tuned)

This uses the same Extra Trees model as XT for classification or regression. A small predefined grid varies candidate features per split, minimum leaf size and bootstrap sampling on a training-only holdout, then the selected model is refitted on the full training fold.

Tree-basedNo regular feature limit specifiedSource ↗

Model profile

Extra Trees (tuned)

Default parameters. Peer models use their prespecified benchmark-default configuration without per-dataset tuning. This card describes that configuration, not the best achievable tuned model.

Operating map

Macro-F1 Elo relative to Random Forest. Columns are training-sample caps; rows are dataset modalities. Small labels show the number of binding targets.

Elo difference vs. Random Forest

Fixed nonlinear scale; extremes capped at ±1,000 Elo.

No result / comparison unavailable

Reliability

Failure rate map

Dataset modality

Failed fits / (successful + failed fits) for the selected model and modality. Design skips are omitted. A dash means no attempted fits; 0% means all attempted fits succeeded. Hover for counts. Colours span 0–20%, with rates above 20% using the darkest shade; cell labels and hover retain the actual rate. This chart is independent of the performance sensitivity view.

Reference benchmark results

Strict Macro-F1 Elo at p=10,000, n=100. Random Forest is anchored at 1,000; intervals are target-bootstrap 95% intervals. These reference results stay fixed while you explore other budgets in the charts. Overlapping intervals do not establish a clear winner.

Dataset modality	Elo	95% interval	Targets
All modalities	1,013	972–1,050	44
DNA methylation	1,088	926–1,283	4
GLM/PLM Embeddings	1,013	806–1,198	4
Gene expression	1,008	921–1,105	10
Genomic prediction	858	577–1,009	4
Metagenomics	1,021	980–1,069	10
Molecular properties	1,016	929–1,104	10
Other	1,094	1,094–1,122	2